Code associated with "Multiscale, resurgent epidemics in a hierarchical metapopulation model", PNAS, 102(32),11157-11162 2005

The code is written in C with a MATLAB wrapper.
You need to use MATLAB to compile the C code, then run it with a MATLAB script.

More information about MATLAB-C interface can be found here:
http://www.mathworks.com/access/helpdesk/help/techdoc/matlab_external/matlab_external.shtml

Main code: sir_hierarchy.c

An example of MATLAB script to run the main code: test_sir_hierarchy.m

Random number generators used: random.h binomial.h

Feel free to use, copy or change the code.
However, please understand that I'm a student and I need to graduate, so I do not provide support.
So if you want to use them, you're on your own.
But, if you find intolerable mistakes in the code you may email me.




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